International Journals
1. Parvathi A. Myer, Hyunjin Kim, Anna M. Blümel, Ellen Finnegan, Alexander Kel, Taylor V. Thompson, John M. Greally, Jochen HM. Prehn, Darran P. O’Connor, Richard A. Friedman, Aris Floratos, Sudipto Das, “Master transcription regulators and transcription factors regulate immune-associated differences between patients of African and European ancestry with Colorectal Cancer”, Gastro Hep Advances, Accepted, Jan, 2022.
2. Hyunjin Kim, Fatemeh Momen-Heravi, Steven Chen, Per Hoffmann, Moritz Kebschull, Panos N Papapanou, “Differential DNA methylation and mRNA transcription in gingival tissues in periodontal health and disease”, Journal of clinical periodontology, 48(9), pp. 1152-1164, 2021.
3. Tamar Paz-Elizur, Yael Leitner-Dagan, Kerstin B Meyer, Barak Markus, Fedrico M Giorgi, Martin O’Reilly, Hyunjin Kim, Yentl Evgy, Ronen Fluss, Laurence S Freedman, Robert C Rintoul, Bruce Ponder, Zvi Livnh, “DNA-Repair Biomarker for Lung Cancer Risk and its Correlation with Airway Cells Gene Expression”, JNCI Cancer Spectrum, pkz067, 2019.
4. Chao Li, Shuo Wang, Jiun-Lin Yan, Rory J Piper, Hongxiang Liu, Turid Torheim, Hyunjin Kim, Jinjing Zou, Natalie R Boonzaier, Rohitashwa Sinha, Tomasz Matys, Florian Markowetz, Stephen J Price, “Intratumoral Heterogeneity of Glioblastoma Infiltration Revealed by Joint Histogram Analysis of Diffusion Tensor Imaging”, Neurosurgery, vol. 85, issue 4, pp.524-534, 2019.
5. Hyunjin Kim, Sang-Min Choi, Sanghyun Park, “GSEH: A novel approach to select prostate cancer-associated genes using gene expression heterogeneity”, IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 15, issue 1, pp.129-146, 2018.
6. Hyunjin Kim, Youngmi Yoon, Jaegyoon Ahn, Sanghyun Park, “A literature-driven method to calculate similarities among diseases”, Computer Methods and Programs in Biomedicine, vol. 122, issue 2, pp.108-122, 2015.
7. Jihwan Ha, Hyunjin Kim, Youngmi Yoon, Sanghyun Park, “A method of extracting disease-related microRNAs through the propagation algorithm using the environmental factor based global miRNA network”, Bio-Medical Materials and Engineering, vol. 26, issue s1, pp.1763-1772, 2015.
8. Jeongwoo Kim, Hyunjin Kim, Youngmi Yoon, Sanghyun Park, “LGscore: A method to identify disease-related genes using biological literature and Google data”, Journal of Biomedical Informatics, vol. 54, pp.270-282, 2015.
9. Chihyun Park, Jaegyoon Ahn, Hyunjin Kim, Sanghyun Park, “Integrative gene network construction to analyze cancer recurrence by using semi-supervised learning”, PLoS One, vol. 9, no. 1, 2014.
10. Hyunjin Kim, Jaegyoon Ahn, Chihyun Park, Youngmi Yoon, Sanghyun Park, “A novel approach to predict prognosis of prostate cancer with inner-class clustering of gene expression data”, Computers in Biology and Medicine, vol. 43, no. 10, pp.1363-1373, 2013.
International Conferences
1. Hyunjin Kim, Steven CH Chen, Fatemeh Momen-Heravi, Per Hoffmann, Moritz Kebschull, Panos N Papapanou, “Differential DNA methylation and mRNA expression in gingival tissues in periodontal health and disease”, The 97th General Session of the International Association for Dental Research (IADR/AADR/CADR 2019), Regular paper, Vancouver, Canada, June, 2019.
2. Hyunjin Kim, Sanghyun Park, “Discovering disease-associated drugs using web crawl data”, The 31st ACM Symposium on Applied Computing (ACM SAC 2016), Regular paper, Pisa, Italy, April, 2016.
3. Jeongwoo Kim, Hyunjin Kim, Yunku Yeu, Mincheol Shin, Sanghyun Park, “TILD: A strategy to identify cancer-related genes using title information in literature data”, The 8th International Workshop on Data and Text Mining in Biomedical Informatics (DTMBIO’14), Poster, Shanghai, China, August, 2015.
4. Hyunjin Kim, Sanghyun Park, “A novel approach to detect disease-related genes using protein-protein interactions and literature-driven gene network”, The 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2013), Poster, Berlin, Germany, July, 2013.
International Patents
1. Sanghyun Park, Hyunjin Kim, Jaegyoon Ahn, Chihyun Park, Youngmi Yoon, “Method for predicting prognosis of cancer”, PCT/KR2015/000228. (applied on January 15th 2015)
2. Sanghyun Park, YooSun Kim, Jaegyoon Ahn, Eunji Shin, Hyunjin Kim, “Apparatus for generating e-book contents and method thereof”, PCT/KR2011/002722. (applied on April 15th 2011)